Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g024220 Solanum pennellii HOM05D004632 ORTHO05D005556 2.4e-266 922.2 678 100.0
Solyc06g065700.3 Solanum lycopersicum HOM05D004632 ORTHO05D005556 9.4e-263 910.2 677 99.1
CAN.G199.61 Capsicum annuum HOM05D004632 ORTHO05D005556 8.0e-246 854.0 678 94.1
Peaxi162Scf00430g00519 Petunia axillaris HOM05D004632 ORTHO05D005556 7.0e-226 787.7 680 87.9
Dinv34967 Davidia involucrata HOM05D004632 ORTHO05D005556 2.4e-202 709.5 679 81.9
Nitab4.5_0003976g0020 Nicotiana tabacum HOM05D004632 ORTHO05D005556 2.8e-198 696.0 735 75.1
Nitab4.5_0007182g0050 Nicotiana tabacum HOM05D004632 ORTHO05D005556 4.0e-197 692.2 463 79.9
CSS0008139 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 1.3e-195 687.2 679 81.3
GSVIVG01035887001 Vitis vinifera HOM05D004632 ORTHO05D005556 6.0e-193 678.3 679 81.0
Cc09_g08590 Coffea canephora HOM05D004632 ORTHO05D005556 5.1e-192 675.2 680 79.4
Prupe.1G392800 Prunus persica HOM05D004632 ORTHO05D005556 4.7e-190 668.7 679 79.2
Rhsim02G0214000 Rhododendron simsii HOM05D004632 ORTHO05D005556 1.4e-189 667.2 681 79.0
Nn8g39852 Nelumbo nucifera HOM05D004632 ORTHO05D005556 1.2e-188 664.1 679 78.4
CiPaw.07G229300 Carya illinoinensis HOM05D004632 ORTHO05D005556 2.9e-187 659.4 678 79.8
MSTRG.9370 Avicennia marina HOM05D004632 ORTHO05D005556 1.1e-186 657.5 679 77.6
Actinidia22297 Actinidia chinensis HOM05D004632 ORTHO05D005556 7.1e-186 654.8 676 78.4
EL10Ac1g00704 Beta vulgaris HOM05D004632 ORTHO05D005556 1.3e-184 650.6 467 74.7
RcHm_v2.0_Chr6g0299541 Rosa chinensis HOM05D004632 ORTHO05D005556 3.0e-184 649.4 679 78.2
HanXRQChr03g0084861 Helianthus annuus HOM05D004632 ORTHO05D005556 2.5e-183 646.4 673 78.5
Ciclev10007613m.g Citrus clementina HOM05D004632 ORTHO05D005556 1.1e-181 641.0 679 77.9
Potri.006G263400 Populus trichocarpa HOM05D004632 ORTHO05D005556 1.1e-181 641.0 677 76.7
MELO3C016968.2 Cucumis melo HOM05D004632 ORTHO05D005556 2.4e-181 639.8 678 77.1
CsaV3_4G036640 Cucumis sativus L. HOM05D004632 ORTHO05D005556 3.1e-181 639.4 678 77.0
Aqoxy7G03810 Aquilegia oxysepala HOM05D004632 ORTHO05D005556 4.0e-181 639.0 679 76.9
Potri.018G020200 Populus trichocarpa HOM05D004632 ORTHO05D005556 5.3e-181 638.6 677 77.7
Sed0004025 Sechium edule HOM05D004632 ORTHO05D005556 1.5e-180 637.1 678 76.7
ECA240G3507 Erigeron canadensis HOM05D004632 ORTHO05D005556 3.8e-179 632.5 676 76.9
FvH4_2g41020 Fragaria vesca HOM05D004632 ORTHO05D005556 4.9e-179 632.1 679 76.9
Lalb_Chr23g0268241 Lupinus albus HOM05D004632 ORTHO05D005556 4.9e-179 632.1 679 75.8
Atru.chr7.2537 Acer truncatum HOM05D004632 ORTHO05D005556 8.4e-179 631.3 679 78.1
DCAR_015265 Daucus carota HOM05D004632 ORTHO05D005556 4.2e-178 629.0 470 69.8
TWI32G0830 Tripterygium wilfordii HOM05D004632 ORTHO05D005556 5.4e-178 628.6 679 75.7
FAN20G0152 Fragaria x ananassa HOM05D004632 ORTHO05D005556 9.3e-178 627.9 693 75.0
Lsat_1_v5_gn_6_77900 Lactuca sativa HOM05D004632 ORTHO05D005556 1.2e-177 627.5 677 78.3
MD00G1143300 Malus domestica HOM05D004632 ORTHO05D005556 1.2e-177 627.5 466 70.4
PSO782G2171 Papaver somniferum HOM05D004632 ORTHO05D005556 1.2e-177 627.5 678 75.1
Sabra06G0205900 Salix brachista HOM05D004632 ORTHO05D005556 1.2e-177 627.5 678 76.4
FAN20G1191 Fragaria x ananassa HOM05D004632 ORTHO05D005556 2.1e-177 626.7 694 74.9
MBI15_g05236_MAGBIO Magnolia biondii HOM05D004632 ORTHO05D005556 4.6e-177 625.5 465 70.1
PSO063G4867 Papaver somniferum HOM05D004632 ORTHO05D005556 6.0e-177 625.2 680 75.1
Manes.16G128700 Manihot esculenta HOM05D004632 ORTHO05D005556 7.9e-177 624.8 676 76.2
Psat5g032640 Pisum sativum HOM05D004632 ORTHO05D005556 7.9e-177 624.8 465 68.6
Glyma.04G061600 Glycine max HOM05D004632 ORTHO05D005556 1.0e-176 624.4 680 75.3
VMungo1309G0882 Vigna mungo HOM05D004632 ORTHO05D005556 1.7e-176 623.6 679 75.6
Glyma.06G062300 Glycine max HOM05D004632 ORTHO05D005556 2.3e-176 623.2 679 75.3
Lsat_1_v5_gn_7_4261 Lactuca sativa HOM05D004632 ORTHO05D005556 3.9e-176 622.5 464 73.1
Ca_15774_v3 Cicer arietinum L. HOM05D004632 ORTHO05D005556 8.7e-176 621.3 679 75.6
Lj7A732T26 Lonicera japonica HOM05D004632 ORTHO05D005556 8.7e-176 621.3 652 74.8
ClCG05G016370 Citrullus lanatus HOM05D004632 ORTHO05D005556 1.9e-175 620.2 685 75.9
Phvul.009G087600 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 4.3e-175 619.0 680 75.3
Migut.N00603 Erythranthe guttata HOM05D004632 ORTHO05D005556 5.6e-175 618.6 676 75.7
Medtr3g106080 Medicago truncatula HOM05D004632 ORTHO05D005556 5.6e-175 618.6 679 75.6
FAN27G1200 Fragaria x ananassa HOM05D004632 ORTHO05D005556 7.4e-175 618.2 466 69.3
Duzib168G2284 Durio zibethinus HOM05D004632 ORTHO05D005556 3.6e-174 615.9 674 76.6
TPR.G1835 Trifolium pratense HOM05D004632 ORTHO05D005556 3.6e-174 615.9 465 68.0
arahy.Tifrunner.gnm1.ann1.21LKMJ Arachis hypogaea HOM05D004632 ORTHO05D005556 6.2e-174 615.1 465 68.0
PGR042G1415 Punica granatum HOM05D004632 ORTHO05D005556 6.2e-174 615.1 678 75.4
Lj1g0022186 Lotus japonicus HOM05D004632 ORTHO05D005556 1.1e-173 614.4 679 75.4
arahy.Tifrunner.gnm1.ann1.8PBG0P Arachis hypogaea HOM05D004632 ORTHO05D005556 1.4e-173 614.0 679 75.1
Ah.05g177560 Amaranthus hybridus HOM05D004632 ORTHO05D005556 3.1e-173 612.8 476 68.7
ATR0739G094 Amborella trichopoda HOM05D004632 ORTHO05D005556 2.2e-171 606.7 676 74.4
BcaB04g19812 Brassica carinata HOM05D004632 ORTHO05D005556 5.5e-170 602.1 678 75.2
Eucgr.C02661 Eucalyptus grandis HOM05D004632 ORTHO05D005556 1.2e-169 600.9 688 73.5
SGA_v2.0_scaffold40G15680 Striga asiatica HOM05D004632 ORTHO05D005556 1.2e-169 600.9 716 72.3
Cpa.g.sc127.22 Carica papaya HOM05D004632 ORTHO05D005556 1.3e-168 597.4 465 66.0
BraA09t36273Z Brassica rapa HOM05D004632 ORTHO05D005556 2.6e-164 583.2 678 74.2
A09p06280 Brassica napus HOM05D004632 ORTHO05D005556 3.4e-164 582.8 678 74.2
BolC9t53613H Brassica oleracea HOM05D004632 ORTHO05D005556 8.4e-163 578.2 464 66.4
Gorai.001G037500 Gossypium raimondii HOM05D004632 ORTHO05D005556 7.1e-162 575.1 673 74.1
THA.LOC104814991 Tarenaya hassleriana HOM05D004632 ORTHO05D005556 7.1e-162 575.1 467 65.3
BcaC04g23574 Brassica carinata HOM05D004632 ORTHO05D005556 1.6e-161 573.9 461 66.4
HPP92_014401 Vanilla planifolia HOM05D004632 ORTHO05D005556 2.1e-161 573.5 679 72.8
C09p06950 Brassica napus HOM05D004632 ORTHO05D005556 2.7e-161 573.2 461 66.4
Gohir.A07G031900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 3.5e-161 572.8 676 74.1
Gohir.D07G035600 Gossypium hirsutum HOM05D004632 ORTHO05D005556 3.9e-160 569.3 676 73.4
Gohir.A05G058900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 1.1e-159 567.8 462 65.6
MSTRG.4644 Avicennia marina HOM05D004632 ORTHO05D005556 3.3e-159 566.2 677 72.8
AT5G25150 Arabidopsis thaliana HOM05D004632 ORTHO05D005556 4.8e-158 562.4 678 73.7
BolC2t12041H Brassica oleracea HOM05D004632 ORTHO05D005556 1.4e-157 560.8 467 64.7
Carub.0006s2297 Capsella rubella HOM05D004632 ORTHO05D005556 1.8e-157 560.5 678 73.3
Sp2g22380 Schrenkiella parvula HOM05D004632 ORTHO05D005556 1.2e-156 557.8 678 72.7
CSS0046974 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 3.8e-155 552.7 615 77.1
Thhalv10003767m.g Eutrema salsugineum HOM05D004632 ORTHO05D005556 8.5e-155 551.6 460 65.4
C02p59830 Brassica napus HOM05D004632 ORTHO05D005556 4.6e-153 545.8 467 63.4
Thecc.09G016800 Theobroma cacao HOM05D004632 ORTHO05D005556 4.6e-153 545.8 571 81.6
Aa31LG11G4400 Aethionema arabicum HOM05D004632 ORTHO05D005556 6.1e-153 545.4 465 63.0
CARHR188340 Cardamine hirsuta HOM05D004632 ORTHO05D005556 6.1e-153 545.4 462 63.4
AUR62023356 Chenopodium quinoa HOM05D004632 ORTHO05D005556 2.3e-152 543.5 466 66.5
Phvul.001G042300 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 8.7e-152 541.6 465 59.8
Os06g0649500 Oryza sativa ssp. japonica HOM05D004632 ORTHO05D005556 1.5e-151 540.8 466 61.8
VMungo0647G2075 Vigna mungo HOM05D004632 ORTHO05D005556 1.5e-151 540.8 464 60.6
A02p39940 Brassica napus HOM05D004632 ORTHO05D005556 2.5e-151 540.0 467 63.0
Hund27424 Selenicereus undatus HOM05D004632 ORTHO05D005556 2.5e-151 540.0 595 53.1
BraA02t08956Z Brassica rapa HOM05D004632 ORTHO05D005556 4.3e-151 539.3 467 62.7
Glyma.17G222200 Glycine max HOM05D004632 ORTHO05D005556 7.4e-151 538.5 465 60.0
vmacro11252 Vaccinium macrocarpon HOM05D004632 ORTHO05D005556 8.2e-150 535.0 359 75.2
AUR62013801 Chenopodium quinoa HOM05D004632 ORTHO05D005556 1.4e-149 534.3 400 70.0
CDE05G3472 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 2.4e-149 533.5 466 60.7
SalBow1G2567 Salvia bowleyana HOM05D004632 ORTHO05D005556 2.9e-147 526.6 393 70.7
Haze_21427 Corylus avellana HOM05D004632 ORTHO05D005556 1.9e-146 523.9 465 62.8
BcaB07g29936 Brassica carinata HOM05D004632 ORTHO05D005556 1.1e-143 514.6 462 60.4
TAR626G1191 Trochodendron aralioides HOM05D004632 ORTHO05D005556 1.1e-143 514.6 567 79.9
AL6G36810 Arabidopsis lyrata HOM05D004632 ORTHO05D005556 6.3e-142 508.8 447 64.4
Zm00001eb388650 Zea mays HOM05D004632 ORTHO05D005556 2.2e-131 473.8 572 75.5
BcaC03g17924 Brassica carinata HOM05D004632 ORTHO05D005556 2.7e-129 466.8 467 57.2
Oeu061252.3 Olea europaea HOM05D004632 ORTHO05D005556 6.3e-126 455.7 715 63.5
Mapoly0009s0169 Marchantia polymorpha HOM05D004632 ORTHO05D005556 2.7e-121 440.3 473 49.9
Pp3c12_23330 Physcomitrium patens HOM05D004632 ORTHO05D005556 1.4e-120 438.0 469 51.4
TAR625G0176 Trochodendron aralioides HOM05D004632 ORTHO05D005556 1.3e-115 421.4 356 64.3
Gohir.D05G060932 Gossypium hirsutum HOM05D004632 ORTHO05D005556 8.0e-113 412.1 414 56.0
Oeu013659.1 Olea europaea HOM05D004632 ORTHO05D005556 2.8e-110 403.7 280 73.6
MD15G1039100 Malus domestica HOM05D004632 ORTHO05D005556 2.3e-107 394.0 322 66.5
CSS0042581 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 5.2e-104 382.9 293 71.7
SMO118G0104 Selaginella moellendorffii HOM05D004632 ORTHO05D005556 1.5e-103 381.3 397 52.6
Actinidia13189 Actinidia chinensis HOM05D004632 ORTHO05D005556 3.6e-89 333.6 681 59.0
Zm00001eb259920 Zea mays HOM05D004632 ORTHO05D005556 3.5e-68 263.8 194 70.1
PRCOL_00000651 Prasinoderma coloniale HOM05D004632 ORTHO05D005556 1.5e-58 231.9 474 33.8
COL.COLO4_18941 Corchorus olitorius HOM05D004632 ORTHO05D005556 1.2e-55 222.2 229 56.3
MD15G1039000 Malus domestica HOM05D004632 ORTHO05D005556 4.9e-54 216.9 149 72.5
SEGI_13945 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 4.9e-54 216.9 173 60.7
MCO11G306 Micromonas commoda HOM05D004632 ORTHO05D005556 3.5e-52 210.7 485 31.1
Dinv40981 Davidia involucrata HOM05D004632 ORTHO05D005556 7.9e-52 209.5 280 50.7
CBR_g41144 Chara braunii HOM05D004632 ORTHO05D005556 7.4e-50 203.0 198 50.0
VMungo1309G1582 Vigna mungo HOM05D004632 ORTHO05D005556 4.8e-49 200.3 136 71.3
Sed0017212 Sechium edule HOM05D004632 ORTHO05D005556 1.4e-48 198.7 578 46.0
MCO11G293 Micromonas commoda HOM05D004632 ORTHO05D005556 1.2e-47 195.7 538 28.4
SEGI_28232 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 2.2e-46 191.4 158 63.9
Manes.03G009801 Manihot esculenta HOM05D004632 ORTHO05D005556 6.7e-43 179.9 490 34.5
CDE05G1210 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 1.9e-42 178.3 142 65.5
CDE05G3588 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 5.3e-40 170.2 130 63.1
AagrBONN_evm.TU.Sc2ySwM_228.3176 Anthoceros agrestis HOM05D003428 ORTHO05D004131 6.5e-38 163.3 148 55.4
Actinidia10511 Actinidia chinensis HOM05D004632 ORTHO05D005556 3.0e-35 154.5 144 59.0
CBR_g39739 Chara braunii HOM05D004632 ORTHO05D005556 1.9e-34 151.8 292 36.6
Hma1.2p1_0059F.1_g032640 Hydrangea macrophylla HOM05D004632 ORTHO05D005556 2.5e-34 151.4 294 88.8
PSO541G0014 Papaver somniferum HOM05D004632 ORTHO05D005556 3.8e-30 137.5 102 65.7
Actinidia09762 Actinidia chinensis HOM05D004632 ORTHO05D005556 5.0e-22 110.5 66 84.8
Cre12.g526950 Chlamydomonas reinhardtii HOM05D004632 ORTHO05D005556 8.0e-20 103.2 525 22.1
SEGI_29407 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 5.7e-18 97.1 68 60.3
Actinidia10512 Actinidia chinensis HOM05D004632 ORTHO05D005556 1.3e-17 95.9 91 57.1
Cfa022837 Carpinus fangiana HOM05D004632 ORTHO05D005556 2.8e-17 94.7 497 25.4
Glyma.14G103500 Glycine max HOM05D004632 ORTHO05D005556 8.2e-17 93.2 120 45.0
SEGI_30848 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 1.2e-15 89.4 77 59.7
Sabra18G0022500 Salix brachista HOM05D004632 ORTHO05D005556 2.6e-15 88.2 287 33.4
Haze_26425 Corylus avellana HOM05D004632 ORTHO05D005556 5.5e-13 80.5 180 33.3
MD15G1038900 Malus domestica HOM05D004632 ORTHO05D005556 8.8e-11 73.2 56 64.3
FAN15G3250 Fragaria x ananassa HOM05D004632 ORTHO05D005556 2.6e-10 71.6 49 73.5
SEGI_21073 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 2.8e-09 68.2 54 68.5
Glyma.14G103600 Glycine max HOM05D004632 ORTHO05D005556 1.2e-07 62.8 54 63.0


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