Gene: Sopen06g023870

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g023870
  • Transcript Identifier Sopen06g023870.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 51341646-51344484 : positive

Gene Family Information

  • ID HOM05D002576
  • #Genes/#Species 264/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g023870.1

Descriptions

  • Description 50S ribosomal protein L21, chloroplast precursor (CL21) (CS-L7) - Spinacia oleracea (Spinach), Ribosomal protein L21 | FUNCTIONS IN: structural constituent of ribosome, RNA binding | INVOLVED IN: response to cold, translation | LOCATED IN: ribosome, chloroplast stroma, nucleus, chloroplast, chloroplast envelope | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L21, conserved site , Ribosomal protein L21 | BEST Arabidopsis thaliana protein match is: Ribosomal protein L21
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G35680
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G35680
GO:0010027
ISO
PLAZA Integrative Orthologythylakoid membrane organization AT1G35680
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT1G35680

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G35680

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G35680
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G35680
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G35680
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT1G35680

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR028909 Ribosomal protein L21-like
IPR036164 L21-like superfamily
IPR001787 Ribosomal protein L21
Mapman id Description
17.7.2.1.19 Protein biosynthesis.organelle machinery.plastidial ribosome.large ribosomal subunit proteome.component psRPL21