Gene: AT1G35680

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G35680
  • Transcript Identifier AT1G35680.1
  • Gene Type Coding gene
  • Location Chr1 : 13208777-13210246 : positive

Gene Family Information

  • ID HOM05D002576
  • #Genes/#Species 264/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G35680.1
  • symbol RPL21C
  • full_name chloroplast ribosomal protein L21
  • uniprot P51412

Descriptions

  • Description Ribosomal protein L21
  • Computational description Ribosomal protein L21; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: response to cold, translation; LOCATED IN: ribosome, chloroplast stroma, nucleus, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L21, conserved site (InterPro:IPR018258), Ribosomal protein L21 (InterPro:IPR001787); BEST Arabidopsis thaliana protein match is: Ribosomal protein L21 (TAIR:AT4G30930.1); Has 7103 Blast hits to 7101 proteins in 2544 species: Archae - 0; Bacteria - 5138; Metazoa - 96; Fungi - 4; Plants - 134; Viruses - 0; Other Eukaryotes - 1731 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
IEP
GOA Databaseresponse to cold
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation
GO:0010027
IMP
Gene Ontologythylakoid membrane organization1
GO:0009793
IMP
Gene Ontologyembryo development ending in seed dormancy1
GO:0009658
IMP
Gene Ontologychloroplast organization1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome2
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0019843
IEA
GOA DatabaserRNA binding
GO:0003729
IDA
Gene OntologymRNA binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0009536
IEA
GOA Databaseplastid
GO:0005634
IDA
GOA Databasenucleus
GO:0005634
HDA
Gene Ontologynucleus4
GO:0009941
IDA
GOA Databasechloroplast envelope
GO:0009941
HDA
Gene Ontologychloroplast envelope5
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma6
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA, HDA
ISM
Gene Ontologychloroplast1 7

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR028909 Ribosomal protein L21-like
IPR036164 L21-like superfamily
IPR001787 Ribosomal protein L21
Mapman id Description
17.7.2.1.19 Protein biosynthesis.organelle machinery.plastidial ribosome.large ribosomal subunit proteome.component psRPL21