Gene: Sopen06g018760

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g018760
  • Transcript Identifier Sopen06g018760.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 46071672-46072391 : positive

Gene Family Information

  • ID HOM05D001680
  • #Genes/#Species 385/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g018760.1

Descriptions

  • Description Encodes a peroxisomal delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation. This enzyme might also be involved in the conversion of indole-3-butyric acid to indole-3-acetic acid via a beta-oxidation-like pathway. | indole-3-butyric acid response 10 (IBR10) | FUNCTIONS IN: catalytic activity, dodecenoyl-CoA delta-isomerase activity | INVOLVED IN: fatty acid catabolic process, root hair elongation, metabolic process, indolebutyric acid metabolic process, response to indolebutyric acid stimulus | LOCATED IN: peroxisome | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Crotonase, core | BEST Arabidopsis thaliana protein match is: 3-hydroxyacyl-CoA dehydratase 1
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009062
ISO
PLAZA Integrative Orthologyfatty acid catabolic process AT4G14440
GO:0080167
ISO
PLAZA Integrative Orthologyresponse to karrikin AT4G14440
GO:0080024
ISO
PLAZA Integrative Orthologyindolebutyric acid metabolic process AT4G14430
GO:0048767
ISO
PLAZA Integrative Orthologyroot hair elongation AT4G14430
GO:0080026
ISO
PLAZA Integrative Orthologyresponse to indolebutyric acid AT4G14430

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0004165
ISO
PLAZA Integrative Orthologydodecenoyl-CoA delta-isomerase activity AT4G14440

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G14440
GO:0005777
ISO
PLAZA Integrative Orthologyperoxisome AT4G14440
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G14440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029045 ClpP/crotonase-like domain superfamily
IPR001753 Enoyl-CoA hydratase/isomerase
Mapman id Description
5.7.3.5.1 Lipid metabolism.lipid degradation.fatty acid degradation.auxiliary degradation activities.dodecenoyl-CoA isomerase