Gene: Sopen06g014110
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen06g014110
- Transcript Identifier Sopen06g014110.1
- Gene Type Coding gene
- Location Spenn-ch06 : 36994132-36997911 : positive
Gene Family Information
- ID HOM05D000002
- #Genes/#Species 26594/98
- Phylogenetic origin
- ID ORTHO05D000001
- #Genes/#Species 28434/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen06g014110.1
Descriptions
- Description Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), Non-catalytic subunit specific to DNA-directed RNA polymerase V | homologous to budding yeast RPB7 | NRPE7 | FUNCTIONS IN: DNA-directed RNA polymerase activity | INVOLVED IN: transcription | LOCATED IN: DNA-directed RNA polymerase V complex | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold , RNA polymerase Rpb7, N-terminal | BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb7-like, N-terminal domain
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0015074 | IEA | InterPro | DNA integration |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0008270 | IEA | InterPro | zinc ion binding |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.1.6.5 | RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 7 |