Gene: Sopen06g014110

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g014110
  • Transcript Identifier Sopen06g014110.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 36994132-36997911 : positive

Gene Family Information

  • ID HOM05D000002
  • #Genes/#Species 26594/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g014110.1

Descriptions

  • Description Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), Non-catalytic subunit specific to DNA-directed RNA polymerase V | homologous to budding yeast RPB7 | NRPE7 | FUNCTIONS IN: DNA-directed RNA polymerase activity | INVOLVED IN: transcription | LOCATED IN: DNA-directed RNA polymerase V complex | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold , RNA polymerase Rpb7, N-terminal | BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb7-like, N-terminal domain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015074
IEA
InterProDNA integration

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
InterProzinc ion binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036397 Ribonuclease H superfamily
IPR036875 Zinc finger, CCHC-type superfamily
IPR001584 Integrase, catalytic core
IPR012340 Nucleic acid-binding, OB-fold
IPR001878 Zinc finger, CCHC-type
IPR012337 Ribonuclease H-like superfamily
IPR025724 GAG-pre-integrase domain
Mapman id Description
15.1.6.5 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 7