Gene: Sopen06g005020

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g005020
  • Transcript Identifier Sopen06g005020.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 5930616-5952576 : negative

Gene Family Information

  • ID HOM05D000002
  • #Genes/#Species 26594/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g005020.1

Descriptions

  • Description Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), member of Cyclic nucleotide gated channel family | cyclic nucleotide-gated channel 15 (CNGC15) | FUNCTIONS IN: cyclic nucleotide binding, calmodulin binding, cation channel activity | INVOLVED IN: potassium ion transport, ion transport, transmembrane transport | LOCATED IN: membrane | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 10 growth stages | CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding , Potassium channel, voltage-dependent, EAG/ELK/ERG , Ion transport , Cyclic nucleotide-binding-like , RmlC-like jelly roll fold , IQ calmodulin-binding region | BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 14
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015074
IEA
InterProDNA integration

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001584 Integrase, catalytic core
IPR036397 Ribonuclease H superfamily
IPR012337 Ribonuclease H-like superfamily
Mapman id Description
35.1 not assigned.annotated