Gene: Sopen06g003280

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g003280
  • Transcript Identifier Sopen06g003280.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 2678077-2680976 : positive

Gene Family Information

  • ID HOM05D002084
  • #Genes/#Species 319/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g003280.1

Descriptions

  • Description Encodes a cyclin-dependent protein kinase. Involved in nuclear DNA replication and plastid division. Located in nucleus and chloroplast. | homolog of yeast CDT1 A (CDT1A) | FUNCTIONS IN: protein binding, cyclin-dependent protein kinase activity | INVOLVED IN: chloroplast organization, DNA replication | LOCATED IN: chloroplast, nucleus | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: DNA replication factor CDT1-like | BEST Arabidopsis thaliana protein match is: homolog of yeast CDT1 B homolog of yeast CDT1 B
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051276
ISO
PLAZA Integrative Orthologychromosome organization AT2G31270
GO:0006260
ISO
PLAZA Integrative OrthologyDNA replication AT2G31270
GO:0048229
ISO
PLAZA Integrative Orthologygametophyte development AT2G31270
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT2G31270

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019901
ISO
PLAZA Integrative Orthologyprotein kinase binding AT2G31270
GO:0070182
ISO
PLAZA Integrative OrthologyDNA polymerase binding AT2G31270
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G31270

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G31270
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G31270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014939 CDT1 Geminin-binding domain-like
IPR038090 DNA replication factor Cdt1, C-terminal WH domain superfamily
IPR036390 Winged helix DNA-binding domain superfamily
IPR032054 DNA replication factor Cdt1, C-terminal
Mapman id Description
13.2.1.3 Cell cycle organisation.DNA replication.preinitiation.helicase auxiliary factor (CDT1)