Gene: Sopen06g002110
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen06g002110
- Transcript Identifier Sopen06g002110.1
- Gene Type Coding gene
- Location Spenn-ch06 : 1273939-1279559 : negative
Gene Family Information
- ID HOM05D000674
- #Genes/#Species 850/100
- Phylogenetic origin
- ID ORTHO05D001490
- #Genes/#Species 399/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen06g002110.1
Descriptions
- Description Omega-3 fatty acid desaturase, endoplasmic reticulum (EC 1.14.19.-) - Nicotiana tabacum (Common tobacco), Chloroplastic enzyme responsible for the synthesis of 16:3 and 18:3 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene expression is induced by wounding in shoot and root. The wound-response in shoot is independent of jasmonic acid mediated pathway whereas the root response is mediated by jasmonic acid. | fatty acid desaturase 7 (FAD7) | FUNCTIONS IN: omega-3 fatty acid desaturase activity | INVOLVED IN: response to cold, response to wounding, fatty acid biosynthetic process, jasmonic acid mediated signaling pathway | LOCATED IN: plastid membrane, chloroplast, chloroplast envelope | EXPRESSED IN: male gametophyte, guard cell, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 , Fatty acid desaturase, type 1 | BEST Arabidopsis thaliana protein match is: fatty acid desaturase 8
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006629 | IEA | InterPro | lipid metabolic process | |
| GO:0006636 | ISO | PLAZA Integrative Orthology | unsaturated fatty acid biosynthetic process | AT2G29980 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016717 | IEA | InterPro | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | |
| GO:0042389 | ISO | PLAZA Integrative Orthology | omega-3 fatty acid desaturase activity | AT2G29980 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT2G29980 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 5.1.7.3 | Lipid metabolism.fatty acid biosynthesis.fatty acid desaturation.delta-12/delta-15 fatty acid desaturase (FAD2/3/6-8) |