Gene: AT2G29980

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G29980
  • Transcript Identifier AT2G29980.1
  • Gene Type Coding gene
  • Location Chr2 : 12781787-12784946 : negative

Gene Family Information

  • ID HOM05D000674
  • #Genes/#Species 850/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G29980.1
  • symbol FAD3
  • Alias AtFAD3
  • uniprot B0ZXL7

Descriptions

  • Description fatty acid desaturase 3
  • Computational description fatty acid desaturase 3 (FAD3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 8 (TAIR:AT5G05580.1); Has 2578 Blast hits to 2575 proteins in 659 species: Archae - 0; Bacteria - 965; Metazoa - 19; Fungi - 262; Plants - 918; Viruses - 0; Other Eukaryotes - 414 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006636
IMP
IEA
Gene Ontologyunsaturated fatty acid biosynthetic process1
GO:0006629
IEA
GOA Databaselipid metabolic process
GO:0006629
IEA
InterProlipid metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016717
IEA
Gene Ontologyoxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0016717
IEA
InterProoxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0102856
IEA
Gene Ontology1-18:2-2-18:2-sn-glycerol-3-phosphocholine desaturase activity
GO:0102859
IEA
Gene Ontology1-18:1-2-18:2-phosphatidylcholine desaturase activity (SN2-18:3 forming)
GO:0102862
IEA
Gene Ontology1-18:2-2-18:2-sn-glycerol-3-phosphocholine desaturase activity (SN2-18:3 forming)
GO:0102872
IEA
Gene Ontology1-16:0-2-18:2-phosphatidylcholine desaturase activity
GO:0042389
IMP, IGI
Gene Ontologyomega-3 fatty acid desaturase activity1 2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005783
IMP
Gene Ontologyendoplasmic reticulum1
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR021863 Fatty acid desaturase, N-terminal
IPR005804 Fatty acid desaturase domain
Mapman id Description
5.1.7.3 Lipid metabolism.fatty acid biosynthesis.fatty acid desaturation.delta-12/delta-15 fatty acid desaturase (FAD2/3/6-8)