Gene: Sopen05g033960
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen05g033960
- Transcript Identifier Sopen05g033960.1
- Gene Type Coding gene
- Location Spenn-ch05 : 77192375-77195162 : positive
Gene Family Information
- ID HOM05D000131
- #Genes/#Species 2694/97
- Phylogenetic origin
- ID ORTHO05D000086
- #Genes/#Species 2333/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen05g033960.1
Descriptions
- Description Pectin lyase-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , AmbAllergen , Pectate lyase/Amb allergen , Pectin lyase fold | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042547 | ISO | PLAZA Integrative Orthology | cell wall modification involved in multidimensional cell growth | AT3G54920 |
| GO:0098542 | ISO | PLAZA Integrative Orthology | defense response to other organism | AT3G54920 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030570 | IEA | InterPro | pectate lyase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031225 | ISO | PLAZA Integrative Orthology | anchored component of membrane | AT5G04310 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.3.5.2 | Cell wall organisation.pectin.modification and degradation.pectate lyase |