Gene: Sopen05g033800

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g033800
  • Transcript Identifier Sopen05g033800.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 77081131-77084561 : negative

Gene Family Information

  • ID HOM05D002669
  • #Genes/#Species 257/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g033800.1

Descriptions

  • Description Encodes a protein with RNAse Z activity suggesting a role in tRNA processing. Protein contains a signal sequence for import into the chloroplast. | CPZ | CONTAINS InterPro DOMAIN/s: Beta-lactamase-like | BEST Arabidopsis thaliana protein match is: tRNAse Z1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008033
ISO
PLAZA Integrative OrthologytRNA processing AT2G04530
GO:0042780
ISO
PLAZA Integrative OrthologytRNA 3'-end processing AT2G04530
GO:0034414
ISO
PLAZA Integrative OrthologytRNA 3'-trailer cleavage, endonucleolytic AT2G04530

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042781
ISO
PLAZA Integrative Orthology3'-tRNA processing endoribonuclease activity AT2G04530

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like
IPR001279 Metallo-beta-lactamase
Mapman id Description
16.6.1 RNA processing.ribonuclease activities.endoribonuclease (RNase Z)