Gene: AT2G04530
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G04530
- Transcript Identifier AT2G04530.1
- Gene Type Coding gene
- Location Chr2 : 1576808-1578611 : positive
Gene Family Information
- ID HOM05D002669
- #Genes/#Species 257/99
- Phylogenetic origin
- ID ORTHO05D003001
- #Genes/#Species 249/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT2G04530.1
- symbol CPZ
- uniprot Q8L633
Descriptions
- Description Metallo-hydrolase/oxidoreductase superfamily protein
- Computational description CPZ; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: tRNAse Z1 (TAIR:AT1G74700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008033 | IEA | GOA Database | tRNA processing | |
| GO:0008033 | TAS | Gene Ontology | tRNA processing | 1 |
| GO:0034414 | IEA | GOA Database | tRNA 3'-trailer cleavage, endonucleolytic | |
| GO:0034414 | IDA | Gene Ontology | tRNA 3'-trailer cleavage, endonucleolytic | 2 |
| GO:0042780 | IDA | Gene Ontology | tRNA 3'-end processing | 2 |
| GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042781 | IEA | GOA Database | 3'-tRNA processing endoribonuclease activity | |
| GO:0042781 | IDA | Gene Ontology | 3'-tRNA processing endoribonuclease activity | 1 |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0004519 | IEA | GOA Database | endonuclease activity | |
| GO:0004518 | IEA | GOA Database | nuclease activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009507 | ISS | Gene Ontology | chloroplast | 1 |
| GO:0009536 | IEA | GOA Database | plastid |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.6.1 | RNA processing.ribonuclease activities.endoribonuclease (RNase Z) |