Gene: Sopen05g033130

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g033130
  • Transcript Identifier Sopen05g033130.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 76505833-76506351 : positive

Gene Family Information

  • ID HOM05D000174
  • #Genes/#Species 2155/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g033130.1

Descriptions

  • Description C2H2 and C2HC zinc fingers superfamily protein | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding | INVOLVED IN: response to chitin, regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: cotyledon, root, petiole | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type | BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2000280
ISO
PLAZA Integrative Orthologyregulation of root development AT2G37430
GO:0042538
ISO
PLAZA Integrative Orthologyhyperosmotic salinity response AT5G59820
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT5G59820
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT3G46070
GO:0009643
ISO
PLAZA Integrative Orthologyphotosynthetic acclimation AT5G59820
GO:0009631
ISO
PLAZA Integrative Orthologycold acclimation AT5G59820
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT5G59820
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT5G59820
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT5G59820
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT5G59820
GO:0071289
ISO
PLAZA Integrative Orthologycellular response to nickel ion AT2G37430
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT2G37430
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT5G59820

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT2G37430

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G37430

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036236 Zinc finger C2H2 superfamily
IPR013087 Zinc finger C2H2-type
Mapman id Description
15.5.15 RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)