Gene: Sopen05g030580

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g030580
  • Transcript Identifier Sopen05g030580.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 74250657-74251262 : negative

Gene Family Information

  • ID HOM05D000124
  • #Genes/#Species 2752/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g030580.1

Descriptions

  • Description encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. | Integrase-type DNA-binding superfamily protein | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT5G61590
GO:0019760
ISO
PLAZA Integrative Orthologyglucosinolate metabolic process AT5G61590
GO:1904277
ISO
PLAZA Integrative Orthologynegative regulation of wax biosynthetic process AT5G61590
GO:0009873
ISO
PLAZA Integrative Orthologyethylene-activated signaling pathway AT5G07580
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G61590

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
InterProDNA binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G61590

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G61590
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT5G07580

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001471 AP2/ERF domain
IPR036955 AP2/ERF domain superfamily
IPR016177 DNA-binding domain superfamily
Mapman id Description
15.5.7.1 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)