Gene: Sopen05g029780

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g029780
  • Transcript Identifier Sopen05g029780.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 73497101-73501339 : positive

Gene Family Information

  • ID HOM05D000138
  • #Genes/#Species 2624/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g029780.1

Descriptions

  • Description Encodes an AP2-domain transcription factor involved in root stem cell identity and root development. | AINTEGUMENTA-like 6 (AIL6) | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: AINTEGUMENTA-like 7 ., Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape)
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0060771
ISO
PLAZA Integrative Orthologyphyllotactic patterning AT5G65510
GO:0010492
ISO
PLAZA Integrative Orthologymaintenance of shoot apical meristem identity AT5G65510
GO:0035265
ISO
PLAZA Integrative Orthologyorgan growth AT5G10510
GO:0060772
ISO
PLAZA Integrative Orthologyleaf phyllotactic patterning AT5G65510
GO:0010080
ISO
PLAZA Integrative Orthologyregulation of floral meristem growth AT5G10510
GO:0060774
ISO
PLAZA Integrative Orthologyauxin mediated signaling pathway involved in phyllotactic patterning AT5G65510
GO:1990110
ISO
PLAZA Integrative Orthologycallus formation AT5G65510
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT5G10510
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT5G10510
GO:1905392
ISO
PLAZA Integrative Orthologyplant organ morphogenesis AT5G10510
GO:0010311
ISO
PLAZA Integrative Orthologylateral root formation AT5G65510

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G10510

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G65510

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016177 DNA-binding domain superfamily
IPR001471 AP2/ERF domain
IPR036955 AP2/ERF domain superfamily
Mapman id Description
15.5.7.3 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (AP2)