Gene: Sopen05g027940

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g027940
  • Transcript Identifier Sopen05g027940.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 70889888-70894641 : positive

Gene Family Information

  • ID HOM05D004437
  • #Genes/#Species 161/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g027940.1

Descriptions

  • Description Involved in the regulation of salt stress. Expression of AtSAP18 is induced by NaCl, cold, drought, ABA, and ethylene treatment. AtSAP18 and HDA19 associate with ERF3 and ERF4 both in vitro and in vivo. | SIN3 associated polypeptide P18 (SAP18) | FUNCTIONS IN: protein binding, transcription regulator activity | INVOLVED IN: response to salt stress, response to abscisic acid stimulus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Sin3 associated polypeptide p18 , Histone deacetylase complex, SAP18 subunit ., Sin3 associated polypeptide p18
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT2G45640
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT2G45640

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G45640

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G45640

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010516 Sin3 associated polypeptide p18
IPR042534 Sin3 associated polypeptide p18 superfamily
IPR017250 Histone deacetylase complex, SAP18 subunit
Mapman id Description
12.3.2.1.1.2.3 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.SNL-HDA19 histone deacetylase complex.associated component SAP18