Gene: Sopen05g010300

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g010300
  • Transcript Identifier Sopen05g010300.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 10613989-10618182 : negative

Gene Family Information

  • ID HOM05D000577
  • #Genes/#Species 965/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g010300.1

Descriptions

  • Description Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. | plant U-box 45 (PUB45) | FUNCTIONS IN: ubiquitin-protein ligase activity | INVOLVED IN: protein ubiquitination | LOCATED IN: ubiquitin ligase complex | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: U box domain , Armadillo-like helical , Armadillo , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
InterProprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0016791
ISO
PLAZA Homology (enrichment)phosphatase activity HOM05D000577
GO:0070696
ISO
PLAZA Integrative Orthologytransmembrane receptor protein serine/threonine kinase binding AT1G27910

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G24330

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR016024 Armadillo-type fold
IPR000225 Armadillo
IPR011989 Armadillo-like helical
IPR003613 U box domain
Mapman id Description
19.2.2.1.4.2.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-II ligase