Gene: Sopen05g002150

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g002150
  • Transcript Identifier Sopen05g002150.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 939098-943719 : positive

Gene Family Information

  • ID HOM05D006206
  • #Genes/#Species 128/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g002150.1

Descriptions

  • Description DEA(D/H)-box RNA helicase family protein | FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif , DNA/RNA helicase, DEAD/DEAH box type, N-terminal , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc05g006130.4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc05g006130.4
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G59990

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G59990

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011545 DEAD/DEAH box helicase domain
IPR001650 Helicase, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
35.1 not assigned.annotated