Gene: Solyc05g006130.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g006130.4
  • Transcript Identifier Solyc05g006130.4.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 883761-887369 : positive

Gene Family Information

  • ID HOM05D006206
  • #Genes/#Species 128/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g006130.4.1
  • uniprot A0A3Q7GCV6
  • gene_id Solyc05g006130

Descriptions

  • Description RNA helicase DEAD17
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
IDA
Gene OntologyRNA metabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003724
IBA
IEA
GOA DatabaseRNA helicase activity
GO:0003724
IDA
Gene OntologyRNA helicase activity1
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003723
IBA
GOA DatabaseRNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G59990

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IBA
GOA Databasechloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR011545 DEAD/DEAH box helicase domain
Mapman id Description
35.1 not assigned.annotated