Gene: Sopen05g001110

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g001110
  • Transcript Identifier Sopen05g001110.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 105547-112413 : negative

Gene Family Information

  • ID HOM05D000779
  • #Genes/#Species 759/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g001110.1

Descriptions

  • Description homeodomain transcription factor KNAT6, belonging to class I of KN transcription factor family (which also includes KNAT1 and KNAT2). Expression is increased in as and bop1 leaf mutants. | KNOTTED1-like homeobox gene 6 (KNAT6) | FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity | INVOLVED IN: meristem maintenance | LOCATED IN: nucleus | EXPRESSED IN: 10 plant structures | EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: KNOX2 , ELK , Homeobox , Homeobox, conserved site , KNOX1 , Homeodomain-like , Homeodomain-related | BEST Arabidopsis thaliana protein match is: KNOTTED-like from Arabidopsis thaliana 2
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0010073
ISO
PLAZA Integrative Orthologymeristem maintenance AT1G23380
GO:0010094
ISO
PLAZA Integrative Orthologyspecification of carpel identity AT1G70510
GO:0009736
ISO
PLAZA Integrative Orthologycytokinin-activated signaling pathway AT1G70510
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene AT1G70510

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G70510
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G23380

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005541 KNOX2
IPR005540 KNOX1
IPR005539 ELK domain
IPR009057 Homeobox-like domain superfamily
IPR001356 Homeobox domain
IPR008422 Homeobox KN domain
Mapman id Description
15.5.3.4 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (KNOX)