Gene: Sopen04g033550

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g033550
  • Transcript Identifier Sopen04g033550.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 74843965-74847401 : positive

Gene Family Information

  • ID HOM05D000050
  • #Genes/#Species 4474/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g033550.1

Descriptions

  • Description RUB1 conjugating enzyme that conjugates CUL1 and is involved in auxin response and embryogenesis. RCE1 protein physically interacts with RBX1, which may be the E3 for CUL1. | RUB1 conjugating enzyme 1 (RCE1) | CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like , Ubiquitin-conjugating enzyme, E2 , RUB1 conjugating enzyme Ubc12 | BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G36800
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT4G36800

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G36800
GO:0019788
ISO
PLAZA Integrative OrthologyNEDD8 transferase activity AT4G36800
GO:0019787
ISO
PLAZA Integrative Orthologyubiquitin-like protein transferase activity AT4G36800

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000608 Ubiquitin-conjugating enzyme E2
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
Mapman id Description
19.2.2.3.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.RUB/NEDD8 conjugation (neddylation).RUB conjugation E2 protein (RCE1)