Gene: Sopen04g029970

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g029970
  • Transcript Identifier Sopen04g029970.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 71568342-71587115 : negative

Gene Family Information

  • ID HOM05D004661
  • #Genes/#Species 156/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g029970.1

Descriptions

  • Description transducin family protein / WD-40 repeat family protein | FUNCTIONS IN: nucleotide binding | INVOLVED IN: biological_process unknown | LOCATED IN: CUL4 RING ubiquitin ligase complex | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein ., WD40/YVTN repeat-like-containing domain
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045717
ISO
PLAZA Integrative Orthologynegative regulation of fatty acid biosynthetic process AT5G10940
GO:0047484
ISO
PLAZA Integrative Orthologyregulation of response to osmotic stress AT5G10940
GO:1901000
ISO
PLAZA Integrative Orthologyregulation of response to salt stress AT5G10940
GO:0009788
ISO
PLAZA Integrative Orthologynegative regulation of abscisic acid-activated signaling pathway AT5G10940

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G10940
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G10940
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G10940
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G10940

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR045151 DDB1- and CUL4-associated factor 8-like
IPR036322 WD40-repeat-containing domain superfamily
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
19.2.2.8.3.4.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 E3 ubiquitin ligase complexes.substrate adaptor activities.substrate adaptor (ASG2)