Gene: Sopen04g018470

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g018470
  • Transcript Identifier Sopen04g018470.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 45095063-45103062 : negative

Gene Family Information

  • ID HOM05D000595
  • #Genes/#Species 943/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g018470.1

Descriptions

  • Description radial swelling mutant shown to be specifically impaired in cellulose production. Encodes the alpha-subunit of a glucosidase II enzyme. | RADIAL SWELLING 3 (RSW3) | FUNCTIONS IN: glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds | INVOLVED IN: response to cadmium ion, cellulose biosynthetic process, defense response to bacterium, unidimensional cell growth | LOCATED IN: endoplasmic reticulum, chloroplast | EXPRESSED IN: 27 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 | BEST Arabidopsis thaliana protein match is: heteroglycan glucosidase 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0009826
ISO
PLAZA Integrative Orthologyunidimensional cell growth AT5G63840
GO:0006491
ISO
PLAZA Integrative OrthologyN-glycan processing AT5G63840
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT5G63840
GO:0030244
ISO
PLAZA Integrative Orthologycellulose biosynthetic process AT5G63840
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT5G63840

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0030246
IEA
InterProcarbohydrate binding
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0033919
ISO
PLAZA Integrative Orthologyglucan 1,3-alpha-glucosidase activity AT5G63840
GO:0015926
ISO
PLAZA Integrative Orthologyglucosidase activity AT5G63840

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT5G63840

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013780 Glycosyl hydrolase, all-beta
IPR017853 Glycoside hydrolase superfamily
IPR025887 Glycoside hydrolase family 31, N-terminal domain
IPR011013 Galactose mutarotase-like domain superfamily
IPR000322 Glycoside hydrolase family 31
Mapman id Description
18.1.1.6.2.1 Protein modification.glycosylation.N-linked glycosylation.complex N-glycan maturation.class-II glucosidase II heterodimer.subunit alpha