Gene: Sopen04g015290
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen04g015290
- Transcript Identifier Sopen04g015290.1
- Gene Type Coding gene
- Location Spenn-ch04 : 31538100-31547112 : positive
Gene Family Information
- ID HOM05D000227
- #Genes/#Species 1818/100
- Phylogenetic origin
- ID ORTHO05D004725
- #Genes/#Species 172/91
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen04g015290.1
Descriptions
- Description centrin2 (CEN2) | FUNCTIONS IN: calcium ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: plasma membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site , EF-HAND 2 , EF-hand-like domain , Calcium-binding EF-hand , EF-hand | BEST Arabidopsis thaliana protein match is: centrin 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010053 | ISO | PLAZA Integrative Orthology | root epidermal cell differentiation | AT4G37010 |
| GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT4G37010 |
| GO:1901527 | ISO | PLAZA Integrative Orthology | abscisic acid-activated signaling pathway involved in stomatal movement | AT3G50360 |
| GO:0009932 | ISO | PLAZA Integrative Orthology | cell tip growth | AT4G37010 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005509 | IEA | InterPro | calcium ion binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G50360 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G50360 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G50360 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 14.6.1.1 | DNA damage response.nucleotide excision repair (NER).global genome nucleotide excision repair (GG-NER).multifunctional centrin (CEN1/2) |
| 16.10.2.3 | RNA processing.messenger ribonucleoparticle (mRNP) export.TREX-2 mRNP trafficking complex.centrin component CEN1/2 |
| 27.7.2 | Multi-process regulation.calcium-dependent signalling.calcium sensor (CML) |