Gene: AT4G37010
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G37010
- Transcript Identifier AT4G37010.2
- Gene Type Coding gene
- Location Chr4 : 17444315-17445380 : positive
Gene Family Information
- ID HOM05D000227
- #Genes/#Species 1818/100
- Phylogenetic origin
- ID ORTHO05D004725
- #Genes/#Species 172/91
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT4G37010.2
- symbol CEN2
- uniprot O23184
Descriptions
- Description centrin 2
- Computational description centrin 2 (CEN2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: DNA repair; LOCATED IN: cytoplasm; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: centrin2 (TAIR:AT3G50360.1); Has 28959 Blast hits to 19034 proteins in 1566 species: Archae - 1; Bacteria - 97; Metazoa - 12402; Fungi - 5615; Plants - 6440; Viruses - 0; Other Eukaryotes - 4404 (source: NCBI BLink).
- Computational description centrin 2 (CEN2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: DNA repair; LOCATED IN: cytoplasm; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: centrin2 (TAIR:AT3G50360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000278 | IBA | GOA Database | mitotic cell cycle | |
| GO:0006974 | IEA | GOA Database | cellular response to DNA damage stimulus | |
| GO:0006281 | IEA | GOA Database | DNA repair | |
| GO:0006281 | IDA | Gene Ontology | DNA repair | 1 |
| GO:0010053 | IMP | Gene Ontology | root epidermal cell differentiation | 2 |
| GO:0009932 | IMP | Gene Ontology | cell tip growth | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005509 | IBA | GOA Database | calcium ion binding | |
| GO:0005509 | IEA | Gene Ontology | calcium ion binding | |
| GO:0005509 | IEA | InterPro | calcium ion binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0003674 | ND | Gene Ontology | molecular_function |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | IDA | Gene Ontology | cytoplasm | 1 |
| GO:0005814 | IBA | GOA Database | centriole | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005886 | HDA | Gene Ontology | plasma membrane | 3 |
| GO:0005575 | ND | Gene Ontology | cellular_component |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 14.6.1.1 | DNA damage response.nucleotide excision repair (NER).global genome nucleotide excision repair (GG-NER).multifunctional centrin (CEN1/2) |
| 16.10.2.3 | RNA processing.messenger ribonucleoparticle (mRNP) export.TREX-2 mRNP trafficking complex.centrin component CEN1/2 |
| 27.7.2 | Multi-process regulation.calcium-dependent signalling.calcium sensor (CML) |