Gene: Sopen04g004430

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g004430
  • Transcript Identifier Sopen04g004430.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 2928441-2932598 : positive

Gene Family Information

  • ID HOM05D000274
  • #Genes/#Species 1592/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g004430.1

Descriptions

  • Description One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). | nuclear-encoded CLP protease P7 (NCLPP7) | FUNCTIONS IN: cobalt ion binding, zinc ion binding | INVOLVED IN: proteolysis | LOCATED IN: in 6 components | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site , Peptidase S14, ClpP | BEST Arabidopsis thaliana protein match is: nuclear encoded CLP protease 5
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
InterProproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004176
IEA
InterProATP-dependent peptidase activity
GO:0004252
IEA
InterProserine-type endopeptidase activity
GO:0008270
ISO
PLAZA Integrative Orthologyzinc ion binding AT5G23140
GO:0050897
ISO
PLAZA Integrative Orthologycobalt ion binding AT5G23140

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G23140
GO:0005759
ISO
PLAZA Integrative Orthologymitochondrial matrix AT5G23140
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G23140
GO:0009840
ISO
PLAZA Integrative Orthologychloroplastic endopeptidase Clp complex AT5G23140
GO:0009532
ISO
PLAZA Integrative Orthologyplastid stroma AT5G23140
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT5G23140

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001907 ATP-dependent Clp protease proteolytic subunit
IPR029045 ClpP/crotonase-like domain superfamily
IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA
Mapman id Description
35.1 not assigned.annotated