Gene: Sopen04g003850

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g003850
  • Transcript Identifier Sopen04g003850.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 2527987-2541881 : positive

Gene Family Information

  • ID HOM05D004594
  • #Genes/#Species 158/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g003850.1

Descriptions

  • Description embryo defective 1579 (emb1579) | FUNCTIONS IN: binding, calcium ion binding | INVOLVED IN: embryo development ending in seed dormancy | LOCATED IN: cytosol | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: EF-HAND 2 , EF-hand-like domain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT2G03150
GO:0055078
ISO
PLAZA Integrative Orthologysodium ion homeostasis AT2G03150

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G03150
GO:0005509
ISO
PLAZA Integrative Orthologycalcium ion binding AT2G03150

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G03150
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G03150

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025224 Cell cycle and apoptosis regulator protein
IPR011992 EF-hand domain pair
IPR025954 DBC1/CARP1 catalytically inactive NUDIX hydrolase domain
Mapman id Description
35.1 not assigned.annotated