Gene: Sopen03g041500

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g041500
  • Transcript Identifier Sopen03g041500.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 75077202-75082540 : positive

Gene Family Information

  • ID HOM05D000070
  • #Genes/#Species 3945/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g041500.1

Descriptions

  • Description 26S proteasome AAA-ATPase subunit RPT1a (RPT1a) mRNA, | regulatory particle triple-A 1A (RPT1A) | FUNCTIONS IN: ATPase activity | INVOLVED IN: ubiquitin-dependent protein catabolic process | LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane | EXPRESSED IN: pollen tube | CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core , ATPase, AAA-type, core , ATPase, AAA-type, conserved site , 26S proteasome subunit P45 | BEST Arabidopsis thaliana protein match is: peptidyl-prolyl cis-trans isomerases, hydrolases, nucleoside-triphosphatases, ATP binding, nucleotide binding, ATPases
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030163
IEA
InterProprotein catabolic process
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT1G53750

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0036402
IEA
InterProproteasome-activating activity
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G53750
GO:0008540
ISO
PLAZA Integrative Orthologyproteasome regulatory particle, base subcomplex AT1G53750
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G53750
GO:0000502
ISO
PLAZA Integrative Orthologyproteasome complex AT1G53750
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G53750

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003593 AAA+ ATPase domain
IPR041569 AAA ATPase, AAA+ lid domain
IPR005937 26S proteasome regulatory subunit P45-like
IPR003959 ATPase, AAA-type, core
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
19.2.5.2.1.1 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.ATPase components.regulatory component RPT1