Gene: Sopen03g039890

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g039890
  • Transcript Identifier Sopen03g039890.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 73884738-73886975 : positive

Gene Family Information

  • ID HOM05D000117
  • #Genes/#Species 2876/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g039890.1

Descriptions

  • Description phytochrome-associated protein 1 (PAP1) | phytochrome-associated protein 1 (PAP1) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: response to auxin stimulus | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation , AUX/IAA protein | BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 18
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009628
ISO
PLAZA Integrative Orthologyresponse to abiotic stimulus Solyc03g121060.4
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat Solyc03g121060.4
GO:1902074
ISO
PLAZA Integrative Orthologyresponse to salt Solyc03g121060.4
GO:0010600
ISO
PLAZA Integrative Orthologyregulation of auxin biosynthetic process Solyc03g121060.4
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin Solyc03g121060.4
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation Solyc03g121060.4
GO:0010102
ISO
PLAZA Integrative Orthologylateral root morphogenesis AT5G25890

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT3G16500
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G51950
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G25890

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033389 AUX/IAA domain
IPR003311 AUX/IAA protein
Mapman id Description
11.2.2.2 Phytohormone action.auxin.perception and signal transduction.transcriptional repressor (IAA/AUX)