Gene: AT3G16500
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G16500
- Transcript Identifier AT3G16500.1
- Gene Type Coding gene
- Location Chr3 : 5612801-5614208 : negative
Gene Family Information
- ID HOM05D000117
- #Genes/#Species 2876/97
- Phylogenetic origin
- ID ORTHO05D000070
- #Genes/#Species 2531/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G16500.1
- symbol PAP1
- Alias IAA26,indole-3-acetic acid inducible 26
- uniprot Q8LAL2
Descriptions
- Description phytochrome-associated protein 1
- Computational description phytochrome-associated protein 1 (PAP1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 18 (TAIR:AT1G51950.1); Has 1982 Blast hits to 1978 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1982; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Solyc03g121060.4 |
| GO:0010600 | ISO | PLAZA Integrative Orthology | regulation of auxin biosynthetic process | Solyc03g121060.4 |
| GO:1902074 | ISO | PLAZA Integrative Orthology | response to salt | Solyc03g121060.4 |
| GO:0009408 | ISO | PLAZA Integrative Orthology | response to heat | Solyc03g121060.4 |
| GO:0009628 | ISO | PLAZA Integrative Orthology | response to abiotic stimulus | Solyc03g121060.4 |
| GO:0006355 | IEA | Gene Ontology | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009734 | IEA | GOA Database | auxin-activated signaling pathway | |
| GO:0009733 | TAS | Gene Ontology | response to auxin | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008195 | IBA | Gene Ontology | phosphatidate phosphatase activity | 2 |
| GO:0042802 | IPI | Gene Ontology | identical protein binding | 3 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 4 |
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 5 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0009507 | ISM | Gene Ontology | chloroplast | |
| GO:0005886 | ISM | Gene Ontology | plasma membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 11.2.2.2 | Phytohormone action.auxin.perception and signal transduction.transcriptional repressor (IAA/AUX) |