Gene: Sopen03g039150

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g039150
  • Transcript Identifier Sopen03g039150.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 73304723-73313621 : positive

Gene Family Information

  • ID HOM05D001315
  • #Genes/#Species 477/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g039150.1

Descriptions

  • Description Coatomer, beta subunit | FUNCTIONS IN: structural molecule activity | INVOLVED IN: intracellular protein transport, vesicle-mediated transport | LOCATED IN: membrane coat, COPI vesicle coat | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , Coatomer, WD associated region , Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 , WD40 repeat , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , Coatomer, beta subunit , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: Coatomer, beta subunit ., Coatomer, WD associated region, Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
InterProintracellular protein transport
GO:0016192
IEA
InterProvesicle-mediated transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005198
IEA
InterProstructural molecule activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030117
IEA
InterPromembrane coat

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006692 Coatomer, WD associated region
IPR036322 WD40-repeat-containing domain superfamily
IPR001680 WD40 repeat
IPR020472 G-protein beta WD-40 repeat
IPR016453 Coatomer beta' subunit (COPB2)
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
22.2.1.1.2 Vesicle trafficking.Golgi-ER retrograde trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.subunit beta2