Gene: Sopen03g037280

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g037280
  • Transcript Identifier Sopen03g037280.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 71823081-71823623 : negative

Gene Family Information

  • ID HOM05D002720
  • #Genes/#Species 253/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g037280.1

Descriptions

  • Description Non-catalytic subunit specific to DNA-directed RNA polymerase V | homologous to budding yeast RPB7 | NRPE7 | FUNCTIONS IN: DNA-directed RNA polymerase activity | INVOLVED IN: transcription | LOCATED IN: DNA-directed RNA polymerase V complex | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold , RNA polymerase Rpb7, N-terminal | BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb7-like, N-terminal domain
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006352
IEA
InterProDNA-templated transcription, initiation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000419
ISO
PLAZA Integrative OrthologyRNA polymerase V complex AT4G14660
GO:0000418
ISO
PLAZA Integrative OrthologyRNA polymerase IV complex AT3G22900

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036898 RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 RNA polymerase Rpb7-like
IPR012340 Nucleic acid-binding, OB-fold
Mapman id Description
15.1.6.5 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 7