Gene: AT3G22900

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G22900
  • Transcript Identifier AT3G22900.1
  • Gene Type Coding gene
  • Location Chr3 : 8115645-8116169 : positive

Gene Family Information

  • ID HOM05D002720
  • #Genes/#Species 253/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G22900.1
  • symbol NRPD7
  • uniprot Q8LE42

Descriptions

  • Description RNA polymerase Rpb7-like, N-terminal domain-containing protein
  • Computational description NRPD7; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase IV complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase Rpb7, N-terminal (InterPro:IPR005576); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb7-like, N-terminal domain (TAIR:AT4G14660.1); Has 574 Blast hits to 574 proteins in 229 species: Archae - 66; Bacteria - 0; Metazoa - 137; Fungi - 175; Plants - 116; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006352
IEA
Gene OntologyDNA-templated transcription, initiation
GO:0006352
IEA
InterProDNA-templated transcription, initiation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003727
IBA
Gene Ontologysingle-stranded RNA binding1
GO:0003697
IBA
Gene Ontologysingle-stranded DNA binding1
GO:0003899
IEA
GOA DatabaseDNA-directed 5'-3' RNA polymerase activity
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0000418
IDA, IPI
Gene OntologyRNA polymerase IV complex2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012340 Nucleic acid-binding, OB-fold
IPR036898 RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 RNA polymerase Rpb7-like
Mapman id Description
15.1.6.5 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 7