Gene: Sopen03g036260
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g036260
- Transcript Identifier Sopen03g036260.1
- Gene Type Coding gene
- Location Spenn-ch03 : 71023934-71028514 : positive
Gene Family Information
- ID HOM05D000467
- #Genes/#Species 1130/96
- Phylogenetic origin
- ID ORTHO05D000379
- #Genes/#Species 1028/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen03g036260.1
Descriptions
- Description Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top help of the embryo during the transition stage of embryogenesis. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background. | TOPLESS (TPL) | FUNCTIONS IN: protein binding, transcription repressor activity, protein homodimerization activity | INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, primary shoot apical meristem specification, jasmonic acid mediated signaling pathway | LOCATED IN: cytosol, nucleus | EXPRESSED IN: 27 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , CTLH, C-terminal LisH motif , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , LisH dimerisation motif , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: TOPLESS-related 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | IEA | InterPro | protein binding |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |