Gene: Sopen03g036260

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g036260
  • Transcript Identifier Sopen03g036260.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 71023934-71028514 : positive

Gene Family Information

  • ID HOM05D000467
  • #Genes/#Species 1130/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g036260.1

Descriptions

  • Description Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top help of the embryo during the transition stage of embryogenesis. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background. | TOPLESS (TPL) | FUNCTIONS IN: protein binding, transcription repressor activity, protein homodimerization activity | INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, primary shoot apical meristem specification, jasmonic acid mediated signaling pathway | LOCATED IN: cytosol, nucleus | EXPRESSED IN: 27 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , CTLH, C-terminal LisH motif , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , LisH dimerisation motif , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: TOPLESS-related 1
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036322 WD40-repeat-containing domain superfamily
IPR027728 Topless family
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
Mapman id Description
35.1 not assigned.annotated