Gene: Sopen03g035270

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g035270
  • Transcript Identifier Sopen03g035270.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 70262899-70265669 : positive

Gene Family Information

  • ID HOM05D004667
  • #Genes/#Species 156/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g035270.1

Descriptions

  • Description Encodes POPEYE (PYE), a bHLH transcription factor regulating response to iron deficiency in Arabidopsis roots. | POPEYE (PYE) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: cellular response to iron ion starvation, iron ion homeostasis, regulation of transcription | LOCATED IN: nucleus, chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055072
ISO
PLAZA Integrative Orthologyiron ion homeostasis Solyc03g116340.3
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT3G47640
GO:0010106
ISO
PLAZA Integrative Orthologycellular response to iron ion starvation AT3G47640

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT3G47640
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G47640

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G47640

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036638 Helix-loop-helix DNA-binding domain superfamily
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
25.4.2.1.4 Nutrient uptake.metal homeostasis.iron.regulation.iron homeostasis regulator (POPEYE)