Gene: Sopen03g033920

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g033920
  • Transcript Identifier Sopen03g033920.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 69081717-69087511 : negative

Gene Family Information

  • ID HOM05D000042
  • #Genes/#Species 4894/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g033920.1

Descriptions

  • Description MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink), This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity. | SEPALLATA 4 (SEP4) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: in 6 processes | LOCATED IN: nucleus | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box , Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0045944
IEA
InterPropositive regulation of transcription by RNA polymerase II
GO:0048441
ISO
PLAZA Integrative Orthologypetal development AT2G03710
GO:0048440
ISO
PLAZA Integrative Orthologycarpel development AT2G03710
GO:0010076
ISO
PLAZA Integrative Orthologymaintenance of floral meristem identity AT2G03710
GO:0048443
ISO
PLAZA Integrative Orthologystamen development AT2G03710
GO:0048442
ISO
PLAZA Integrative Orthologysepal development AT2G03710

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
InterProDNA binding
GO:0046983
IEA
InterProprotein dimerization activity
GO:0000977
IEA
InterProRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G03710

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002487 Transcription factor, K-box
IPR002100 Transcription factor, MADS-box
IPR033896 MADS MEF2-like
IPR036879 Transcription factor, MADS-box superfamily
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)