Gene: Sopen03g033460

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g033460
  • Transcript Identifier Sopen03g033460.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 68708032-68709786 : negative

Gene Family Information

  • ID HOM05D000812
  • #Genes/#Species 727/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g033460.1

Descriptions

  • Description Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD and attach the ADP-ribose-moiety from NAD to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response. | similar to RCD one 5 (SRO5) | FUNCTIONS IN: NAD ADP-ribosyltransferase activity | INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to salt stress | LOCATED IN: mitochondrion | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) polymerase, catalytic domain | BEST Arabidopsis thaliana protein match is: similar to RCD one 4
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0072593
ISO
PLAZA Integrative Orthologyreactive oxygen species metabolic process AT5G62520
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G62520

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G62520

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G62520

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022003 RST domain
IPR044964 Inactive poly [ADP-ribose] polymerase RCD1/SRO1-5
Mapman id Description
35.1 not assigned.annotated