Gene: Sopen03g033460
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g033460
- Transcript Identifier Sopen03g033460.1
- Gene Type Coding gene
- Location Spenn-ch03 : 68708032-68709786 : negative
Gene Family Information
- ID HOM05D000812
- #Genes/#Species 727/97
- Phylogenetic origin
- ID ORTHO05D000672
- #Genes/#Species 692/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen03g033460.1
Descriptions
- Description Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD and attach the ADP-ribose-moiety from NAD to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response. | similar to RCD one 5 (SRO5) | FUNCTIONS IN: NAD ADP-ribosyltransferase activity | INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to salt stress | LOCATED IN: mitochondrion | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) polymerase, catalytic domain | BEST Arabidopsis thaliana protein match is: similar to RCD one 4
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0072593 | ISO | PLAZA Integrative Orthology | reactive oxygen species metabolic process | AT5G62520 |
GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT5G62520 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G62520 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G62520 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |