Gene: Sopen03g027680
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g027680
- Transcript Identifier Sopen03g027680.1
- Gene Type Coding gene
- Location Spenn-ch03 : 63267949-63274520 : negative
Gene Family Information
- ID HOM05D003872
- #Genes/#Species 179/97
- Phylogenetic origin
- ID ORTHO05D004592
- #Genes/#Species 176/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen03g027680.1
Descriptions
- Description RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | LOCATED IN: endomembrane system | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030433 | ISO | PLAZA Integrative Orthology | ubiquitin-dependent ERAD pathway | AT1G65040 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G16090 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G65040 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.4.2.1.1 | Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).HRD1 E3 ubiquitin ligase complex.E3 ubiquitin ligase component HRD1 |