Gene: Sopen03g025640

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g025640
  • Transcript Identifier Sopen03g025640.2
  • Gene Type Coding gene
  • Location Spenn-ch03 : 59103704-59105771 : negative

Gene Family Information

  • ID HOM05D000983
  • #Genes/#Species 613/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g025640.2

Descriptions

  • Description Alpha-amylase isozyme 3B precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) - Oryza sativa (Rice), Predicted to be secreted protein based on signalP prediction. Involved in starch mobilization. Mutants are defective in alpha-amylase activity. . | alpha-amylase-like (AMY1) | FUNCTIONS IN: alpha-amylase activity | INVOLVED IN: response to gibberellin stimulus, response to abscisic acid stimulus | LOCATED IN: extracellular region, apoplast | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 13 , Alpha-amylase, plant , Glycoside hydrolase, catalytic core , Glycoside hydrolase, subgroup, catalytic core , Glycosyl hydrolase, family 13, catalytic domain , Alpha-amylase, C-terminal beta-sheet | BEST Arabidopsis thaliana protein match is: alpha-amylase-like 2
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0005987
ISO
PLAZA Integrative Orthologysucrose catabolic process Os08g0473900
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin AT4G25000
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT4G25000
GO:0005983
ISO
PLAZA Integrative Orthologystarch catabolic process Os08g0473900

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0004556
IEA
InterProalpha-amylase activity
GO:0005509
IEA
InterProcalcium ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT4G25000
GO:0005576
ISO
PLAZA Integrative Orthologyextracellular region AT4G25000

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017853 Glycoside hydrolase superfamily
IPR006047 Glycosyl hydrolase, family 13, catalytic domain
IPR013775 Alpha-amylase, plant
Mapman id Description
3.2.3.3.1.1 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.alpha amylase