Gene: Sopen03g024610
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g024610
- Transcript Identifier Sopen03g024610.1
- Gene Type Coding gene
- Location Spenn-ch03 : 57373469-57377186 : negative
Gene Family Information
- ID HOM05D000268
- #Genes/#Species 1624/99
- Phylogenetic origin
- ID ORTHO05D000261
- #Genes/#Species 1248/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen03g024610.1
Descriptions
- Description Encodes a SU(VAR)3-9 homolog, a methyltransferase involved in histone methylation. The protein was shown to bind to methylated cytosines of CG, CNG and CNN motifs but has a preference for the latter two. This is a member of a subfamily of SET proteins that shares a conserved SRA domain. | SU(VAR)3-9 homolog 6 (SUVH6) | FUNCTIONS IN: methyl-CpNpG binding, methyltransferase activity, methyl-CpG binding, methyl-CpNpN binding | INVOLVED IN: histone methylation | LOCATED IN: nucleus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: SET domain , SRA-YDG , Pre-SET zinc-binding sub-group , Pre-SET domain , Post-SET domain | BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 5
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0034968 | IEA | InterPro | histone lysine methylation |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | IEA | InterPro | protein binding | |
GO:0008270 | IEA | InterPro | zinc ion binding | |
GO:0018024 | IEA | InterPro | histone-lysine N-methyltransferase activity |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IEA | InterPro | nucleus |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
50.2.1 | Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group |