Gene: Sopen03g017090

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g017090
  • Transcript Identifier Sopen03g017090.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 37218019-37245298 : negative

Gene Family Information

  • ID HOM05D000188
  • #Genes/#Species 2040/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g017090.1

Descriptions

  • Description DNA-binding protein, putative | FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding | LOCATED IN: cellular_component unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core , Restriction endonuclease, type I, R subunit/Type III, Res subunit , DNA helicase, putative , DEAD-like helicase, N-terminal | BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004386
IEA
InterProhelicase activity
GO:0003677
IEA
InterProDNA binding
GO:0005524
IEA
InterProATP binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G03270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041677 DNA2/NAM7 helicase, helicase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003593 AAA+ ATPase domain
IPR041679 DNA2/NAM7 helicase-like, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR004483 Helicase SMUBP-2/Hcs1-like
Mapman id Description
35.1 not assigned.annotated