Gene: Sopen03g011440

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g011440
  • Transcript Identifier Sopen03g011440.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 17046698-17053673 : negative

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g011440.1

Descriptions

  • Description P-loop containing nucleoside triphosphate hydrolases superfamily protein | FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity | LOCATED IN: peroxisome | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif , DNA/RNA helicase, DEAD/DEAH box type, N-terminal , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc03g052980.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0003724
IEA
InterProRNA helicase activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G58570

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR011545 DEAD/DEAH box helicase domain
IPR044763 Ded1/Dbp1, DEAD-box helicase domain
Mapman id Description
35.1 not assigned.annotated