Gene: Sopen03g004560
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g004560
- Transcript Identifier Sopen03g004560.1
- Gene Type Coding gene
- Location Spenn-ch03 : 3327112-3330654 : positive
Gene Family Information
- ID HOM05D000368
- #Genes/#Species 1307/100
- Phylogenetic origin
- ID ORTHO05D009348
- #Genes/#Species 104/82
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen03g004560.1
Descriptions
- Description VASCULAR-RELATED NAC-DOMAIN 6 | CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type , Zinc finger, CCHC retroviral-type | BEST Arabidopsis thaliana protein match is: zinc knuckle (CCHC-type) family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030042 | ISO | PLAZA Homology (enrichment) | actin filament depolymerization | HOM05D000368 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0003779 | ISO | PLAZA Homology (enrichment) | actin binding | HOM05D000368 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015629 | ISO | PLAZA Homology (enrichment) | actin cytoskeleton | HOM05D000368 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |