Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 1.7e-90 336.7 262 100.0
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 4.1e-89 332.0 262 98.9
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 7.2e-86 321.2 262 96.9
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 5.0e-55 218.8 294 63.6
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 2.0e-43 180.3 281 62.6
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 1.9e-41 173.7 279 69.5
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 4.1e-41 172.6 284 69.0
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 4.1e-41 172.6 282 63.8
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 3.5e-40 169.5 275 60.0
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 7.8e-40 168.3 273 69.2
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 7.8e-40 168.3 275 66.9
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 1.3e-39 167.5 270 69.6
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 3.0e-39 166.4 277 65.7
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 1.1e-38 164.5 278 65.8
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 1.5e-38 164.1 261 69.7
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 1.9e-38 163.7 272 68.4
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 3.3e-38 162.9 276 69.2
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 4.3e-38 162.5 267 70.0
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 5.6e-38 162.2 281 68.3
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 7.3e-38 161.8 272 65.8
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 9.5e-38 161.4 273 66.7
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 2.8e-37 159.8 277 67.9
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 2.8e-37 159.8 282 64.9
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 8.0e-37 158.3 262 70.2
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 2.3e-36 156.8 292 65.1
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 3.1e-36 156.4 277 64.3
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 5.2e-36 155.6 269 65.4
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 6.8e-36 155.2 243 73.3
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 6.8e-36 155.2 265 69.4
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 6.8e-36 155.2 277 58.5
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 1.2e-35 154.5 281 63.3
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 2.6e-35 153.3 281 65.8
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 4.4e-35 152.5 280 67.9
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 5.8e-35 152.1 294 64.6
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 2.2e-34 150.2 277 65.7
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 2.9e-34 149.8 275 64.7
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 3.7e-34 149.4 272 62.9
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 3.7e-34 149.4 287 66.2
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 4.9e-34 149.1 271 62.7
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 1.4e-33 147.5 278 66.5
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 1.9e-33 147.1 281 58.0
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 2.4e-33 146.7 270 62.2
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 3.2e-33 146.4 286 63.3
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 3.2e-33 146.4 285 55.8
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 3.2e-33 146.4 266 67.7
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 9.2e-33 144.8 284 65.5
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 1.2e-32 144.4 270 62.2
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.6e-32 144.1 282 56.7
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 2.1e-32 143.7 276 63.0
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 2.7e-32 143.3 282 56.7
Nitab4.5_0001842g0090 Nicotiana tabacum HOM05D000368 ORTHO05D009348 3.5e-32 142.9 265 48.7
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 3.5e-32 142.9 283 64.3
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 6.0e-32 142.1 271 62.0
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 7.8e-32 141.7 289 61.9
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 1.0e-31 141.4 263 49.8
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 1.3e-31 141.0 286 63.6
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 8.6e-31 138.3 149 71.8
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.5e-30 137.5 252 59.5
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 1.9e-30 137.1 239 68.6
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 7.3e-30 135.2 284 64.1
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 7.3e-30 135.2 284 64.1
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 7.3e-30 135.2 281 63.0
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 9.5e-30 134.8 268 47.4
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 1.6e-29 134.0 149 74.5
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 6.2e-29 132.1 282 65.2
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 1.1e-28 131.3 271 65.3
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 1.4e-28 131.0 268 64.9
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 4.0e-28 129.4 257 68.1
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 5.2e-28 129.0 128 70.3
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 3.4e-27 126.3 282 57.4
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 5.8e-27 125.6 98 69.4
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 5.8e-27 125.6 98 69.4
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 7.6e-27 125.2 283 55.5
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 2.2e-26 123.6 318 55.7
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 2.9e-26 123.2 151 72.8
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 2.9e-26 123.2 277 63.5
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 3.7e-26 122.9 270 64.1
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 6.4e-26 122.1 266 39.5
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 1.1e-25 121.3 103 65.0
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 1.4e-25 120.9 271 58.7
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 1.9e-25 120.6 153 54.9
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.2e-24 117.9 279 54.1
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 3.5e-24 116.3 272 58.1
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 1.3e-23 114.4 270 62.2
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 1.3e-23 114.4 277 60.6
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 2.3e-23 113.6 267 56.6
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 4.3e-22 109.4 98 62.2
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 7.3e-22 108.6 270 62.2
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 7.3e-22 108.6 255 58.0
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 1.6e-21 107.5 270 60.4
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 6.2e-21 105.5 239 64.0
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 1.4e-20 104.4 97 62.9
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 1.4e-20 104.4 97 62.9
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 1.8e-20 104.0 273 58.6
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 2.4e-20 103.6 275 58.5
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 3.1e-20 103.2 307 46.3
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 3.5e-16 89.7 101 50.5
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 1.5e-14 84.3 97 56.7
Peaxi162Scf00444g00851 Petunia axillaris HOM05D000368 ORTHO05D009348 1.5e-14 84.3 69 69.6
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 1.9e-14 84.0 98 52.0
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 5.6e-14 82.4 158 58.9
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 2.7e-08 63.5 54 53.7
Dinv24556 Davidia involucrata HOM05D000368 ORTHO05D009348 6.0e-08 62.4 140 68.6
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 1.3e-07 61.2 107 47.7
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 6.6e-07 58.9 99 40.4
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 4.3e-06 56.2 44 54.5
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 5.6e-06 55.8 302 43.0


User provided reference genes

Program Settings