Gene: Sopen03g003420
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g003420
- Transcript Identifier Sopen03g003420.1
- Gene Type Coding gene
- Location Spenn-ch03 : 2142015-2145562 : negative
Gene Family Information
- ID HOM05D000050
- #Genes/#Species 4474/100
- Phylogenetic origin
- ID ORTHO05D000380
- #Genes/#Species 1028/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen03g003420.1
Descriptions
- Description ubiquitin conjugating enzyme | ubiquitin conjugating enzyme 9 (UBC9) | FUNCTIONS IN: ubiquitin-protein ligase activity | INVOLVED IN: ubiquitin-dependent protein catabolic process | LOCATED IN: endomembrane system | EXPRESSED IN: male gametophyte, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like , Ubiquitin-conjugating enzyme, E2 | BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 10
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006511 | ISO | PLAZA Integrative Orthology | ubiquitin-dependent protein catabolic process | AT4G27960 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004842 | ISO | PLAZA Integrative Orthology | ubiquitin-protein transferase activity | AT4G27960 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G08690 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.2.5.2 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.MUB conjugation.conjugation E2 protein |