Gene: Sopen03g003090

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g003090
  • Transcript Identifier Sopen03g003090.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 1733141-1775353 : negative

Gene Family Information

  • ID HOM05D004403
  • #Genes/#Species 162/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g003090.1

Descriptions

  • Description cleavage and polyadenylation specificity factor 160 (CPSF160) | FUNCTIONS IN: nucleic acid binding | INVOLVED IN: mRNA cleavage, mRNA polyadenylation | LOCATED IN: nucleus | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, A subunit, C-terminal | BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1A
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G51660

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004871 Cleavage/polyadenylation specificity factor, A subunit, C-terminal
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR018846 Cleavage/polyadenylation specificity factor, A subunit, N-terminal
Mapman id Description
16.3.1.2.1 RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.component CPSF160/Yhh1