Gene: Sopen03g001540

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g001540
  • Transcript Identifier Sopen03g001540.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 404968-405603 : positive

Gene Family Information

  • ID HOM05D000124
  • #Genes/#Species 2752/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g001540.1

Descriptions

  • Description encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3. | ethylene response factor 1 (ERF1) | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009873
IEA
InterProethylene-activated signaling pathway
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006952
ISO
PLAZA Integrative Orthologydefense response AT3G23240
GO:0009867
ISO
PLAZA Integrative Orthologyjasmonic acid mediated signaling pathway AT3G23240

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G23240
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G23240

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G23240
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT3G23240

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044808 Ethylene-responsive transcription factor
IPR001471 AP2/ERF domain
IPR036955 AP2/ERF domain superfamily
IPR016177 DNA-binding domain superfamily
Mapman id Description
15.5.7.1 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)