Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 0.0e+00 1517.3 1056 100.0
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 0.0e+00 1483.4 1056 98.2
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 0.0e+00 1374.4 1056 92.0
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 0.0e+00 1243.0 1056 86.8
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 0.0e+00 1104.4 979 80.7
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 2.4e-305 1052.4 1069 74.4
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 6.9e-305 1050.8 1067 74.7
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 4.6e-293 1011.5 1060 74.0
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 1.7e-290 1003.0 1059 63.0
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 1.2e-288 996.9 1060 73.4
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 1.2e-288 996.9 1060 73.4
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 1.7e-287 993.0 1068 73.1
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 2.2e-287 992.6 1121 70.1
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 2.2e-287 992.6 1065 73.0
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 2.9e-287 992.3 1105 72.3
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 1.1e-286 990.3 1053 72.8
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 1.9e-286 989.6 1051 73.5
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 9.4e-286 987.3 1058 74.1
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.0e-284 982.2 1079 72.4
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 1.1e-283 980.3 1107 70.3
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 1.5e-283 979.9 1089 71.5
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 2.6e-283 979.2 1050 72.4
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 3.3e-283 978.8 1125 69.2
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 7.4e-283 977.6 1108 70.3
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 2.8e-282 975.7 1102 70.5
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 4.8e-282 974.9 1064 70.4
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 8.2e-282 974.2 1059 72.0
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 1.8e-281 973.0 1057 71.3
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 2.4e-281 972.6 1114 70.9
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 2.4e-281 972.6 1050 72.4
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 4.1e-281 971.8 1061 72.9
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 9.1e-281 970.7 1061 71.9
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 1.6e-280 969.9 1061 72.2
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 2.6e-280 969.1 1074 71.4
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 2.6e-280 969.1 1052 72.6
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 2.9e-279 965.7 1073 71.8
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 1.9e-278 963.0 1078 70.1
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 2.7e-277 959.1 1111 69.6
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 3.6e-277 958.7 1066 71.9
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 6.1e-277 958.0 1132 70.3
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 6.1e-277 958.0 1116 69.4
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 6.1e-277 958.0 1107 69.5
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 3.0e-276 955.7 1116 69.4
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 5.2e-276 954.9 1065 70.3
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 6.7e-276 954.5 1057 71.7
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 1.1e-275 953.7 1058 73.6
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 1.7e-274 949.9 1116 69.2
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 2.8e-274 949.1 491 95.5
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 2.0e-272 943.0 1084 67.8
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 1.5e-270 936.8 1064 70.2
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 1.9e-270 936.4 1053 71.1
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 1.2e-269 933.7 1056 69.6
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 2.1e-269 932.9 1056 71.6
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 3.6e-269 932.2 1080 67.3
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 1.0e-268 930.6 1112 69.2
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 2.3e-268 929.5 1058 71.5
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 4.0e-268 928.7 1052 70.0
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 2.0e-267 926.4 1081 71.0
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 7.5e-267 924.5 1054 72.0
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 7.5e-267 924.5 1057 72.1
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 9.8e-267 924.1 1055 71.2
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 1.3e-266 923.7 1076 66.4
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 3.7e-266 922.2 1065 67.1
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 6.3e-266 921.4 1147 47.0
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 1.2e-264 917.1 1057 71.5
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 1.0e-263 914.1 1088 69.3
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.7e-263 913.3 1088 69.2
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 3.8e-263 912.1 1060 69.3
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 3.2e-262 909.1 1059 66.4
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 3.2e-262 909.1 1059 66.4
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 7.2e-262 907.9 1086 66.6
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 4.0e-260 902.1 1058 69.5
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 1.2e-259 900.6 1058 69.3
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 2.4e-257 892.9 1067 62.8
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 9.2e-257 891.0 1062 65.7
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.0e-256 889.8 1066 70.7
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 5.9e-256 888.3 1115 66.4
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.1e-254 884.0 1076 68.2
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 2.5e-254 882.9 1062 65.9
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 6.1e-253 878.2 1237 44.1
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 5.2e-252 875.2 1054 68.9
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 2.7e-248 862.8 1070 67.0
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 1.3e-247 860.5 1065 64.9
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 4.3e-246 855.5 1058 67.2
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 1.2e-245 854.0 1017 66.4
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 2.1e-245 853.2 1055 68.5
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 4.7e-245 852.0 1072 61.3
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.4e-244 850.5 1061 68.0
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 4.0e-244 849.0 1055 68.1
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 1.7e-231 807.0 923 74.1
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 2.8e-229 799.7 1062 66.3
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 1.8e-228 797.0 485 79.2
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 2.3e-228 796.6 911 73.2
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 5.6e-222 775.4 492 76.6
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 6.4e-218 761.9 493 75.1
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 4.6e-216 755.7 799 66.6
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 2.2e-210 736.9 1048 58.5
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 2.7e-208 729.9 1058 53.9
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 8.1e-205 718.4 1052 61.6
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 9.0e-204 714.9 489 72.8
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 2.3e-183 647.1 916 65.3
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 1.3e-178 631.3 986 57.9
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 1.9e-177 627.5 483 64.2
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 9.7e-158 562.0 854 67.3
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 3.7e-149 533.5 344 82.3
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 4.7e-144 516.5 446 60.8
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 2.7e-139 500.7 1047 44.9
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 8.9e-135 485.7 819 66.5
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 2.0e-131 474.6 1044 46.5
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 4.4e-110 403.7 253 75.1
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 1.2e-99 369.0 537 39.5
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 1.7e-98 365.2 504 44.8
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 1.1e-92 345.9 698 58.9
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 1.3e-90 339.0 205 79.0
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 1.7e-85 322.0 202 75.7
MD15G1292300 Malus domestica HOM05D004966 ORTHO05D006199 4.2e-84 317.4 357 51.0
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 2.6e-70 271.6 459 37.0
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 3.8e-69 267.7 503 36.8
FAN23G2362 Fragaria x ananassa HOM05D004966 ORTHO05D006199 3.3e-65 254.6 345 52.5
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 2.2e-64 251.9 171 71.3
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 2.1e-59 235.3 266 49.6
CiPaw.01G008100 Carya illinoinensis HOM05D004966 ORTHO05D006199 1.8e-58 232.3 324 51.9
Cpa.g.sc6.59 Carica papaya HOM05D004966 ORTHO05D006199 1.2e-51 209.5 130 76.2
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 1.0e-45 189.9 133 64.7
Cpa.g.sc6.60 Carica papaya HOM05D004966 ORTHO05D006199 7.5e-41 173.7 99 80.8
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 8.2e-40 170.2 130 66.9
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 1.4e-39 169.5 130 66.9
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 6.5e-37 160.6 93 86.0
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 6.1e-35 154.1 181 48.6
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 8.0e-35 153.7 112 69.6
Glyma.11G051067 Glycine max HOM05D004966 ORTHO05D006199 2.3e-34 152.1 138 60.1
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 3.4e-33 148.3 93 76.3
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 1.2e-30 139.8 93 73.1
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.9e-28 132.5 74 77.0
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 2.0e-25 122.5 105 65.7
RcHm_v2.0_Chr1g0315291 Rosa chinensis HOM05D004966 ORTHO05D006199 1.3e-24 119.8 81 71.6
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 3.7e-24 118.2 198 37.9
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 1.4e-23 116.3 142 46.5
ATR0030G036 Amborella trichopoda HOM05D004966 ORTHO05D006199 3.9e-13 81.6 120 39.2
CSS0042095 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.4e-10 73.2 42 81.0
Lsat_1_v5_gn_8_118440 Lactuca sativa HOM05D004966 ORTHO05D231273 7.5e-09 67.4 49 55.1
CBR_g36362 Chara braunii HOM05D004966 ORTHO05D006199 6.4e-08 64.3 186 28.5
CSS0029353 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.6e-06 59.7 35 82.9


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