Gene: Sopen02g036920
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g036920
- Transcript Identifier Sopen02g036920.1
- Gene Type Coding gene
- Location Spenn-ch02 : 57848806-57850305 : negative
Gene Family Information
- ID HOM05D000063
- #Genes/#Species 3996/96
- Phylogenetic origin
- ID ORTHO05D002792
- #Genes/#Species 261/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen02g036920.1
Descriptions
- Description Involved in radial organization of the root and shoot axial organs. Essential for normal shoot gravitropism. The protein moves in a highly specific manner from the cells of the stele in which it is synthesized outward. Movement requires sequences within the GRAS and VHIID domains. | SHORT ROOT (SHR) | CONTAINS InterPro DOMAIN/s: Transcription factor GRAS | BEST Arabidopsis thaliana protein match is: GRAS family transcription factor
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008356 | IEA | InterPro | asymmetric cell division | |
| GO:0009956 | IEA | InterPro | radial pattern formation | |
| GO:0048366 | IEA | InterPro | leaf development | |
| GO:0055072 | ISO | PLAZA Integrative Orthology | iron ion homeostasis | AT4G37650 |
| GO:0009959 | ISO | PLAZA Integrative Orthology | negative gravitropism | AT4G37650 |
| GO:0009958 | ISO | PLAZA Integrative Orthology | positive gravitropism | AT4G37650 |
| GO:0009660 | ISO | PLAZA Integrative Orthology | amyloplast organization | AT4G37650 |
| GO:0045930 | ISO | PLAZA Integrative Orthology | negative regulation of mitotic cell cycle | AT4G37650 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0043565 | IEA | InterPro | sequence-specific DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G37650 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT4G37650 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |