Gene: Sopen02g032880
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g032880
- Transcript Identifier Sopen02g032880.1
- Gene Type Coding gene
- Location Spenn-ch02 : 54528184-54530084 : positive
Gene Family Information
- ID HOM05D000008
- #Genes/#Species 9932/97
- Phylogenetic origin
- ID ORTHO05D000005
- #Genes/#Species 8869/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen02g032880.1
Descriptions
- Description Encodes a MIXTA-like MYB gene NOECK (NOK). Loss of function mutations show an increased number of branchpoints in leaf trichomes suggesting a role in negative regulation of trichome branching. | myb domain protein 106 (MYB106) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: trichome branching, regulation of transcription, DNA-dependent | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: SANT, DNA-binding , Homeodomain-like , Myb, DNA-binding , Myb transcription factor , Homeodomain-related , HTH transcriptional regulator, Myb-type, DNA-binding | BEST Arabidopsis thaliana protein match is: myb domain protein 16
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:2000070 | ISO | PLAZA Integrative Orthology | regulation of response to water deprivation | AT5G07690 |
| GO:0010105 | ISO | PLAZA Integrative Orthology | negative regulation of ethylene-activated signaling pathway | AT5G07690 |
| GO:0009819 | ISO | PLAZA Integrative Orthology | drought recovery | AT5G07690 |
| GO:0009759 | ISO | PLAZA Integrative Orthology | indole glucosinolate biosynthetic process | AT1G18570 |
| GO:0009617 | ISO | PLAZA Integrative Orthology | response to bacterium | AT1G18570 |
| GO:0052544 | ISO | PLAZA Integrative Orthology | defense response by callose deposition in cell wall | AT1G18570 |
| GO:0009867 | ISO | PLAZA Integrative Orthology | jasmonic acid mediated signaling pathway | AT5G07690 |
| GO:0009625 | ISO | PLAZA Integrative Orthology | response to insect | AT1G18570 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT1G18570 |
| GO:0010091 | ISO | PLAZA Integrative Orthology | trichome branching | AT3G01140 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT5G07690 |
| GO:0009644 | ISO | PLAZA Integrative Orthology | response to high light intensity | AT5G07690 |
| GO:0000902 | ISO | PLAZA Integrative Orthology | cell morphogenesis | AT5G15310 |
| GO:0009682 | ISO | PLAZA Integrative Orthology | induced systemic resistance | AT1G18570 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT5G07690 |
| GO:1905255 | ISO | PLAZA Integrative Orthology | regulation of RNA binding transcription factor activity | AT5G07690 |
| GO:0035017 | ISO | PLAZA Integrative Orthology | cuticle pattern formation | AT5G15310 |
| GO:0031930 | ISO | PLAZA Integrative Orthology | mitochondria-nucleus signaling pathway | AT5G07690 |
| GO:0050832 | ISO | PLAZA Integrative Orthology | defense response to fungus | AT5G07690 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT5G60890 |
| GO:0010438 | ISO | PLAZA Integrative Orthology | cellular response to sulfur starvation | AT5G07690 |
| GO:0000162 | ISO | PLAZA Integrative Orthology | tryptophan biosynthetic process | AT5G60890 |
| GO:0010439 | ISO | PLAZA Integrative Orthology | regulation of glucosinolate biosynthetic process | AT5G07690 |
| GO:1901957 | ISO | PLAZA Integrative Orthology | regulation of cutin biosynthetic process | AT5G15310 |
| GO:0002213 | ISO | PLAZA Integrative Orthology | defense response to insect | AT5G60890 |
| GO:0009755 | ISO | PLAZA Integrative Orthology | hormone-mediated signaling pathway | AT5G07690 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT5G07690 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G07690 |
| GO:0003700 | ISO | PLAZA Integrative Orthology | DNA-binding transcription factor activity | AT5G07690 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G18570 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G61420 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G74080 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.2.1 | RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB) |